| SPECIMEN | TEST |
| Spontaneous sputum | Gram stain, AFB stain, cultures for mycobacteria and pyogenic bacteria |
| Induced sputum | P. carinii stain, AFB stain, mycobacterial culture |
| Bronchoalveolar lavage fluid | P. carinii stain, AFB stain, mycobacterial and fungal cultures |
| Transbronchial biopsy tissue | Touch preparations and tissue stains for P. carinii, AFB stain, hematoxylin and eosin tissue stain, cult |
| Needle aspiration biopsy tissue | P. carinii stain, AFB stain, cytologic examination, cultures for mycobacteria and fungi |
AFB = Acid-fast bacilli